Recent publications


Järvi L., Havu M., Ward H.C., Bellucco V., McFadden J.P., Toivonen T., Heikinheimo V., Kolari P., Riikonen A., and Grimmond C.S.B. (2019). Spatial modeling of local-scale biogenic and anthropogenic carbon dioxide emissions in Helsinki. Journal of Geophysical Research: Atmospheres, 124(15), 8363–8384.

Kiuru P., Ojala A., Mammarella I., Heiskanen J., Erkkilä K.-M., Miettinen H., Vesala T., and Huttula T. (2019). Applicability and consequences of the integration of alternative models for CO2 transfer velocity into a process-based lake model, Biogeosciences, 16(17), 3297–3317.

Kooijmans L.M., Sun W., Aalto J., Erkkilä K.-M., Maseyk K., Seibt U., Vesala T., Mammarella I., and Chen H. (2019). Influences of light and humidity on carbonyl sulfide-based estimates of photosynthesis, Proceedings of the National Academy of Sciences, 116(7), 2470–2475.

Korkiakoski M., Tuovinen J.-P., Penttilä T., Sarkkola S., Ojanen P., Minkkinen K., Rainne J., Laurila T., and Lohila A. (2019). Greenhouse gas and energy fluxes in a boreal peatland forest after clear-cutting, Biogeosciences, 16(19), 3703–3723.

Korrensalo A., Mehtätalo L., Alekseychik P., Uljas S., Mammarella I., Vesala T., and Tuittila E.-S. (2019). Varying vegetation composition, respiration and photosynthesis decrease temporal variability of the CO2 sink in a boreal bog, Ecosystems, .

Mäkelä J., Knauer J., Aurela M., Black A., Heimann M., Kobayashi H., Lohila A., Mammarella I., Margolis H., Markkanen T., Susiluoto J., Thum T., Viskari T., Zaehle S., and Aalto T. (2019). Parameter calibration and stomatal conductance formulation comparison for boreal forests with adaptive population importance sampler in the land surface model JSBACH, Geosci. Model Dev., 12(9), 4075–4098.

Männistö E., Korrensalo A., Alekseychik P., Mammarella I., Peltola O., Vesala T., and Tuittila E.-S. (2019). Multi-year methane ebullition measurements from water and bare peat surfaces of a patterned boreal bog, Biogeosciences, 16(11), 2409–2421.

Peaucelle M., Bacour C., Ciais P., Vuichard N., Kuppel S., Peñuelas J., Belelli Marchesini L., Blanken P.D., Buchmann N., Chen J., Delpierre N., Desai A.R., Dufrene E., Gianelle D., Gimeno‐Colera C., Gruening C., Helfter C., Hörtnagl L., Ibrom A., Joffre R., Kato T., Kolb T.E., Law B., Lindroth A., Mammarella I., Merbold L., Minerbi S., Montagnani L., Šigut L., Sutton M., Varlagin A., Vesala T., Wohlfahrt G., Wolf S., Yakir D., and Viovy N. (2019). Covariations between plant functional traits emerge from constraining parameterization of a terrestrial biosphere model, Global Ecology and Biogeography, 28(9), 1351–1365. 

Peltola O., Vesala T., Gao Y., Räty O., Alekseychik P., Aurela M., Chojnicki B., Desai A.R., Dolman A.J., Euskirchen E.S., Friborg T., Göckede M., Helbig M., Humphreys E., Jackson R.B., Jocher G., Joos F., Klatt J., Knox S.H., Kowalska N., Kutzbach L., Lienert S., Lohila A., Mammarella I., Nadeau D.F., Nilsson M.B., Oechel W.C., Peichl M., Pypker T., Quinton W., Rinne J., Sachs T., Samson M., Schmid H.P., Sonnentag O., Wille C., Zona D., and Aalto T. (2019). Monthly gridded data product of northern wetland methane emissions based on upscaling eddy covariance observations, Earth Syst. Sci. Data, 11(3), 1263–1289.

Stoy P.C., El-Madany T.S., Fisher J.B., Gentine P., Gerken T., Good S.P., Klosterhalfen A., Liu S., Miralles D.G., Perez-Priego O., Rigden A.J., Skaggs T.H., Wohlfahrt G., Anderson R.G., Coenders-Gerrits A.M.J., Jung M., Maes W.H., Mammarella I., Mauder M., Migliavacca M., Nelson J.A., Poyatos R., Reichstein M., Scott R.L., and Wolf S. (2019). Reviews and syntheses: Turning the challenges of partitioning ecosystem evaporation and transpiration into opportunities, Biogeosciences, 16(19), 3747–3775.

ICOS ECO Station Protocols

International Agrophysics, vol 32, issue 4, 2018



Alekseychik P., Mammarella I., Lindroth A., Lohila A., Aurela M., Laurila T., Kasurinen V., Lund M., Rinne J., Nilsson M.B., Peichl M., Minkkinen K., Shurpali N.J., Tuittila E.-S., Martikainen P.J., Tuovinen J.-P., and Vesala T. (2018). Surface energy exchange in pristine and managed boreal peatlands, Mires and peat, 21, 14. DOI: 10.19189/MaP.2018.OMB.333.

Barskov K.V., Glazunov A.V., Repina I.A., Stepanenko V. M., Lykossov V.N., and Mammarella I. (2018). On the applicability of similarity theory for the stable atmospheric boundary layer over complex terrain, Izv. Atmos. Ocean. Phys., 54(5), 462–471.

Ducker J.A., Holmes C.D., Keenan T.F., Fares S., Goldstein A.H., Mammarella I., Munger J.W., and Schnell J. (2018). Synthetic ozone deposition and stomatal uptake at flux tower sites, Biogeosciences, 15, 53955413.

Erkkilä K.-M., Ojala A., Bastviken D., Biermann T., Heiskanen J.J., Lindroth A., Peltola O., Rantakari M., Vesala T., and Mammarella I. (2018). Methane and carbon dioxide fluxes over a lake: comparison between eddy covariance, floating chambers and boundary layer method, Biogeosciences, 15, 429–445.

Franz D., Acosta M., Altimir N., … Aurela M, … Kolari P., … Laurila T., … Lohila A., … Mammarella I., … Peltola O., Pihlatie M., … Pumpanen J., … Tuittila E.-S., Tuovinen J.-P., … and Vesala T. (2018). Towards long-term standardised carbon and greenhouse gas observations for monitoring Europe's terrestrial ecosystems: a review, International Agrophysics, 32(4), 439–455.

Gielen B., Acosta M., Altimir N., Buchmann N., Cescatti A., Ceschia E., Fleck S., Hörtnagl L., Klumpp K., Kolari P., Lohila, A., Loustau D., Marańon-Jimenez S., Manise T., Matteucci G., Merbold L., Metzger C., Moureaux C., Montagnani L., Nilsson M.B., Osborne B., Papale D., Pavelka M., Saunders M., Simioni G., Soudani K., Sonnentag O., Tallec T., Tuittila E.-S., Peichl M., Pokorny R., Vincke C., and Wohlfahrt G. (2018). Ancillary vegetation measurements at ICOS ecosystem stations, International Agrophysics, 32(4), 645–664.

Hari P., Noe S., Dengel S., Elbers J., Gielen B., Kerminen V.-M., Kruijt B., Kulmala L., Lindroth A., Mammarella I., Petäjä T., Schurgers G., Vanhatalo A., Kulmala M., and Bäck J. (2018). Prediction of photosynthesis in Scots pine ecosystems across Europe by a needle-level theory, Atmos. Chem. Phys., 18, 1332113328.

Honkanen M., Tuovinen J.-P., Laurila T., Mäkelä T., Hatakka J., Kielosto S., and Laakso L. (2018). Measuring turbulent CO2 fluxes with a closed-path gas analyzer in a marine environment, Atmos. Meas. Tech., 11, 5335–5350.

Järvi L., Rannik Ü., Kokkonen T.V., Kurppa M., Karppinen A., Kouznetsov R.D., Rantala P., Vesala T., and Wood C.R. (2018). Uncertainty of eddy covariance flux measurements over an urban area based on two towers, Atmos. Meas. Tech., 11, 54215438.

Katul G., Peltola O., Grönholm T., Launiainen S., Mammarella I., and Vesala T. (2018). Ejective and sweeping motions above a peatland and their role in relaxed-eddy-accumulation measurements and turbulent transport modelling. Boundary-Layer Meteorology, 169(2), 163–184.

Kiuru P., Ojala A., Mammarella I., Heiskanen J., Kämäräinen M., Vesala T., and Huttula T. (2018). Effects of climate change on CO2 concentration and efflux in a humic boreal lake: A modeling study. Journal of Geophysical Research: Biogeosciences, 123(7), 22122233.

Korrensalo A., Kettunen L., Laiho R., Alekseychik P., Vesala T., Mammarella I., and Tuittila, E.-S. (2018) Boreal bog plant communities along a water‐table gradient differ by their standing biomass but not by their biomass production. Journal of Vegetation Science, 29(2), 136146.

Nemitz E., Mammarella I., Ibrom A., Aurela M., Burba G.G., Dengel S., Gielen B., Grelle A., Heinesch B., Herbst M., Hörtnagl L., Klemedtsson L., Lindroth A., Lohila A., McDermitt D.K., Merbold L., Nelson D., Nicolini G., Nilsson M.B., Peltola O., Rinne J., and Zahniser M. (2018). Standardisation of eddy-covariance flux measurements of methane and nitrous oxide. International Agrophysics, 32(4), 517–549.

Palonen V., Pumpanen J., Kulmala L., Levin I., Heinonsalo J., and Vesala, T. (2018). Seasonal and diurnal variations in atmospheric and soil air 14CO2 in a boreal Scots pine forest. Radiocarbon, 60(1), 283–297.

Pavelka M., Acosta M., Kiese R., Altimir N., Brümmer C., Crill P., Darenova E., Fuß R., Gielen B., Graf A., Klemedtsson L., Lohila A., Longdoz B., Lindroth A., Nilsson M., Maraňón Jiménez S., Merbold L., Montagnani L., Peichl M., Pihlatie M., Pumpanen J., Serrano Ortiz P., Silvennoinen H., Skiba U., Vestin P., Weslien P., Janous D., and Kutsch W. (2018). Standardisation of chamber technique for CO2, N2O and CH4 fluxes measurements from terrestrial ecosystems. International Agrophysics, 32(4), 569–587.

Peltola O., Raivonen M., Li X., and Vesala T. (2018). Comparison of methane ebullition modelling approaches used in terrestrial wetland models. Biogeosciences, 15(3), 937.

Peltoniemi M., Aurela M., Böttcher K., Kolari P., Loehr J., Hokkanen T., Karhu J., Linkosalmi M., Tanis C.M., Metsämäki S., Tuovinen J.-P., Vesala T., Arslan A.N. (2018). Networked web-cameras monitor congruent seasonal development of birches with phenological field observations. Agricultural and Forest Meteorology, 249, 335–347.

Peltoniemi M., Aurela M., Böttcher K., Kolari P., Loehr J., Karhu J., Linkosalmi M., Tanis C.M., Tuovinen J.-P., and Arslan A.N. (2018). Webcam network and image database for studies of phenological changes of vegetation and snow cover in Finland, image time series from 2014 to 2016. Earth Syst. Sci. Data, 10, 173–184.

Provenzale M., Ojala A., Heiskanen J., Erkkilä K.-M., Mammarella I., Hari P., and Vesala T. (2018). High-frequency productivity estimates for a lake from free-water CO2 concentration measurements, Biogeosciences, 15, 20212032.

Rebmann C., Aubinet M., Schmid H., Arriga N., Aurela M., Burba G., Clement R., De Ligne A., Fratini G., Gielen B., Grace J., Graf A., Gross P., Haapanala S., Herbst M., Hörtnagl L., Ibrom A., Joly L., Kljun N., Kolle O., Kowalski A., Lindroth A., Loustau D., Mammarella I., Mauder M., Merbold L., Metzger S., Mölder M., Montagnani L., Papale D., Pavelka M., Peichl M., Roland M., Serrano-Ortiz P., Siebicke L., Steinbrecher R., Tuovinen J.-P., Vesala T., Wohlfahrt G., and Franz D. (2018). ICOS eddy covariance flux-station site set up: a review. International Agrophysics, 32(4), 471–494.

Rinne J., Tuittila E.-S., Peltola O., Li X., Raivonen M., Alekseychik P., Haapanala S., Pihlatie M., Aurela M., Mammarella I., and Vesala, T. (2018). Temporal variation of ecosystem scale methane emission from a boreal fen in relation to temperature, water table position, and carbon dioxide fluxes. Global Biogeochemical Cycles, 32(7), 10871106.

Sun W., Kooijmans L.M.J., Maseyk K., Chen H., Mammarella I., Vesala T., Levula J., Keskinen H., and Seibt U. (2018). Soil fluxes of carbonyl sulfide (COS), carbon monoxide, and carbon dioxide in a boreal forest in southern Finland, Atmos. Chem. Phys., 18, 1363–1378.

Susiluoto J., Raivonen M., Backman L., Laine M., Mäkelä J., Peltola O., Vesala T., and Aalto T. (2018). Calibrating the sqHIMMELI v1.0 wetland methane emission model with hierarchical modeling and adaptive MCMC. Geosci. Model Dev., 11, 1199–1228.



Alekseychik P. K., Korrensalo A., Mammarella I., Vesala T., and Tuittila E.-S. (2017). Relationship between aerodynamic roughness length and bulk sedge leaf area index in a mixed-species boreal mire complex, Geophys. Res. Lett., 44, 5836–5843.

Dinsmore K. J., Drewer J., Levy P. E., George C., Lohila A., Aurela M., and Skiba U. M. (2017). Growing season CH4 and N2O fluxes from a subarctic landscape in northern Finland; from chamber to landscape scale, Biogeosciences, 14, 799815.

Keronen P. (2017). Flux and concentration measurements of carbon dioxide and ozone in a forested environment. Doctoral dissertation. Report Series in Aerosol Science, 204.

Kooijmans L. M. J., Maseyk K., Seibt U., Sun W., Vesala T., Mammarella I., Kolari P., Aalto J., Franchin A., Vecchi R., Valli G., and Chen H. (2017). Canopy uptake dominates nighttime carbonyl sulfide fluxes in a boreal forest, Atmos. Chem. Phys., 17, 1145311465.

Korkiakoski M., Tuovinen J.-P., Aurela M., Koskinen M., Minkkinen K., Ojanen P., Penttilä T., Rainne J., Laurila T., and Lohila A. (2017). Methane exchange at the peatland forest floor – automatic chamber system exposes the dynamics of small fluxes, Biogeosciences, 14, 19471967.